Have you tried the GAG builder: glycam.org/gag
It can probably build the structure. Let me know if you disagree.
On Mon, Oct 15, 2018 at 4:24 PM Marcelo Andrade Chagas <
andrade.mchagas.gmail.com> wrote:
> Dear AMBER researchers,
>
> I have an issue:
>
> What force field do you use to a protein with fondaparinux?
>
> There is some GLYCAM force field for the fondaparinux structure,
> as shown below?
>
> Thank you
>
> [image: image.png]
> Dr. Marcelo Andrade Chagas,
> http://lattes.cnpq.br/7024808363863350
> *eCsMo**Lab**: Laboratório de Estudos Computacionais em Sistemas
> Moleculares*
> Laboratório de Química Computacional e Modelagem Molecular - LQC-MM
> * http://lqcmm.qui.ufmg.br/
>
> Departamento de Química, ICEx, Universidade Federal de Minas Gerais
>
> 31270-901, Pampulha, Belo Horizonte, MG, Brazil.
> Tel:(31)3409-5776
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
:-) Lachele
Lachele Foley
CCRC/UGA
Athens, GA USA
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Received on Tue Oct 16 2018 - 07:30:03 PDT
