Hi Charu/Karishma,
It is highly recommended that you read the AMBER manual (
http://ambermd.org/doc12/Amber18.pdf), and also, visit the amberMD web page (
http://ambermd.org/FileFormats.php) that has all your answers.
Here, you will find information on FF14SB (
http://pubs.acs.org/doi/abs/10.1021/acs.jctc.5b00255)
Leaprc.ff14SB is the file to source Amber14 force field parameters.
FYI, from AMBER16 onwards this is "leaprc.protein.ff14SB"
Hope this helps
Best Regards
Elvis Martis
Mumbai, INDIA.
________________________________________
From: Charu Sharma (JRF) <charu.sharma.lnmiit.ac.in>
Sent: 09 October 2018 10:03
To: amber-subscribe.ambermd.org; Dr. Ashok Garai; AMBER.ambermd.org
Subject: [AMBER] Regarding Leap
Hello everyone,
This is karishma , i want to know basic difference between AMBER topology
file extension, coordinates file extension as well as about Leaparc.ff14SB.
Thanking you,
Regards
karishma Sharma
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Received on Mon Oct 08 2018 - 23:00:03 PDT
