I want to convert amber topology to gromacs topology. So I have tried using parmed but it fails. Here is the command i have used:/home/saikat/softwares/AMBER/amber18/bin/parmed -p 148d-wat-0-reduce-oct.prmtop -c 148d-wat-0-reduce-oct.inpcrd
Error shows:
Traceback (most recent call last):
File "/home/saikat/softwares/AMBER/amber18/bin/parmed", line 6, in <module>
from pkg_resources import load_entry_point
File "/home/saikat/softwares/AMBER/amber18/miniconda/lib/python2.7/site-packages/setuptools-27.2.0-py2.7.egg/pkg_resources/__init__.py", line 2985, in <module>
File "/home/saikat/softwares/AMBER/amber18/miniconda/lib/python2.7/site-packages/setuptools-27.2.0-py2.7.egg/pkg_resources/__init__.py", line 2971, in _call_aside
File "/home/saikat/softwares/AMBER/amber18/miniconda/lib/python2.7/site-packages/setuptools-27.2.0-py2.7.egg/pkg_resources/__init__.py", line 2998, in _initialize_master_working_set
File "/home/saikat/softwares/AMBER/amber18/miniconda/lib/python2.7/site-packages/setuptools-27.2.0-py2.7.egg/pkg_resources/__init__.py", line 662, in _build_master
File "/home/saikat/softwares/AMBER/amber18/miniconda/lib/python2.7/site-packages/setuptools-27.2.0-py2.7.egg/pkg_resources/__init__.py", line 675, in _build_from_requirements
File "/home/saikat/softwares/AMBER/amber18/miniconda/lib/python2.7/site-packages/setuptools-27.2.0-py2.7.egg/pkg_resources/__init__.py", line 854, in resolve
pkg_resources.DistributionNotFound: The 'ParmEd==3.0.0+57.g74a84d30' distribution was not found and is required by the application
Thanks and Regards,
Saikat Pal
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Received on Thu Oct 04 2018 - 05:00:04 PDT
