On Thu, Aug 9, 2018 at 6:39 AM Subrata Paul <paul.subrata34.gmail.com> wrote:
>
> Dear All
> I have tried
> /home/Software/Amber16/amber16/bin/cpptraj -i process_mdcrd.cpptraj
>
> it shows
> /home/Software/Amber16/amber16/bin/cpptraj: error while loading shared
> libraries: libsander.so: cannot open shared object file: No such file
> or directory
You need to source $AMBERHOME/amber.sh or $AMBERHOME/amber.csh before
running AmberTools cpptraj.
-Dan
>
> my process_mdcrd.cpptraj is
> parm pro_wat_ions.prmtop
> trajin density-eqm-10.mdcrd
> trajin density-eqm-11.mdcrd
> trajin density-eqm-12.mdcrd
> trajin density-eqm-13.mdcrd
> trajin density-eqm-14.mdcrd
> trajin density-eqm-15.mdcrd
> autoimage
> trajout den-eqm-all-300K.mdcrd
>
> --
>
>
>
>
> *With Best RegardsDr. Subrata PaulUGC-Dr. D. S. Kothari Post Doctoral
> FellowDepartment of Chemical Sciences*
>
> *Tezpur University*
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Received on Thu Aug 09 2018 - 10:00:02 PDT
