one more thing, Do I need to modify some paths in my source file now?
On Tue, 13 Mar 2018 at 20:14 malkeet singh Bahia <msbahia17.gmail.com>
wrote:
> Thanks!
> I tried using ./configure_mpich from AMBERHOME/AMBERTOOL/////src and and
> as per suggestions installed mpich in this directory. then running
> configure script created a bin folder in AMBERHOME. bin directory contain
> ~20 files like mpi** . Now what to do?
> should i go back to amberhome and use./configure -mpi gnu ?
>
> Many thanks in advance!
>
> On Tue, 13 Mar 2018 at 18:34 Daniel Roe <daniel.r.roe.gmail.com> wrote:
>
>> On Tue, Mar 13, 2018 at 12:14 PM, malkeet singh Bahia
>> <msbahia17.gmail.com> wrote:
>> > Than I tried with mpi flag and getting same error as earlier (i'm
>> working
>> > on it)
>>
>> The issue with your MPI build is with your compilers, as Dave
>> previously indicated. Your MPI compiler is configure for Intel, and
>> your Intel license appears expired. One workaround is to download and
>> unpack Mpich or Openmpi in $AMBERHOME/AmberTools/src and then use
>> 'configure_mpich' or 'configure_openmpi' to build your own MPI (which
>> will live in $AMBERHOME).
>>
>> > when i used -cuda flag the installation is complete but in make test, it
>> > showed 'error while loading shared libraries:libcurand.so.6.5: cannot
>> open
>> > the shared object file.
>> >
>> > I have added few paths in the .cshrc file, please have a look on this
>> and
>> > tell me if anything needed to be changed
>> >
>> > setenv CUDA_HOME /usr/local/cuda-6.5/
>> > setenv LD_LIBRARY_PATH
>> > "/usr/local/cuda-6.5/targets/x86_64-linux/lib/:${LD_LIBRARY_PATH}"
>> > setenv PATH "${path}:${CUDA_HOME}/bin"
>>
>> Try $CUDA_HOME/lib64 instead.
>>
>> -Dan
>>
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> --
> Thanks & Warm Regards
>
>
> Malkeet S. Bahia, PhD
> Post Doctoral Fellow at the lab of Prof. Hanoch Senderowitz
> PBC Indo-Israel Post-doc fellowship
> Dept. of Chemistry, Building 211, Room no. 211
> Bar Ilan University, Ramat Gan, 5290002, ISRAEL
>
> Mobile: +91-9815988501 <098159%2088501> (India, watts app only)
> +972-584553434 <+972%2058-455-3434> (Israel number)
>
--
Thanks & Warm Regards
Malkeet S. Bahia, PhD
Post Doctoral Fellow at the lab of Prof. Hanoch Senderowitz
PBC Indo-Israel Post-doc fellowship
Dept. of Chemistry, Building 211, Room no. 211
Bar Ilan University, Ramat Gan, 5290002, ISRAEL
Mobile: +91-9815988501 (India, watts app only)
+972-584553434 (Israel number)
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Received on Tue Mar 13 2018 - 11:30:02 PDT
