[AMBER] How to generate parameters for two MG 2+ ions ---GTP

From: Rana Rehan Khalid <rrkhalid.umich.edu>
Date: Mon, 26 Feb 2018 21:02:02 +0500

Dear Amber users

My protein system have GTP and two Mg+2 ions, which have electrostatic
interactions with two Aspartic acid Asp residues. How i can generate the
force filed for this, can I generate the parameters for this metallic
system by using Antechamber or i have to use MCPB.py for this. Kindly guide
me Thanks.

Regards
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Received on Mon Feb 26 2018 - 08:30:03 PST