[AMBER] Amber16 installation: Segmentation fault (core dumped) error when execute antechamber

From: Yuan Hu <Yuan.Hu.alkermes.com>
Date: Tue, 23 Jan 2018 00:03:01 +0000

Dear Amber Community,

I'm trying to install Amber16 with AmberTools17 with the following command.

export AMBERHOME=$PWD
./configure --python-install local --with-python /usr/bin/python2.7 gnu

My workstation is using Red Hat Enterprise Linux Server release 7.2 (Maipo).
No error messages during the installation step.
However, when I try to run antechamber, I got the following error:

$ antechamber
/usr/local/software/amber16/bin/antechamber: line 4: 19146 Segmentation fault (core dumped) $AMBERHOME/bin/to_be_dispatched/antechamber "$."

I further check all the programs compiled from folder: $AMBERHOME/AmberTools/src/antechamber/, and all of them don't work.
I didn't find a solution in the archives. Does anyone know how to solve this problem?
Thanks.


Best,
Yuan
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Received on Mon Jan 22 2018 - 16:30:03 PST
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