Re: [AMBER] DNA melting temperature

From: matheus froeyen <matheus.froeyen.gmail.com>
Date: Tue, 9 Jan 2018 11:56:32 +0100

Please take a look at:

A Lomzov et al. 2015:
http://pubs.acs.org/doi/abs/10.1021/acs.jpcb.5b09645

best rgrds
mathy

On Tue, Jan 9, 2018 at 10:16 AM, Marie Brut <marie.brut.laas.fr> wrote:

> Dear AMBER users,
>
> I have run MD simulation of DNA duplexes to evaluate the binding free
> energy using MMPBSA. I need now to estimate and compare the melting
> temperature of these duplexes.
> Can I have any help for this? This question has already been posted but
> received no answer:
> http://archive.ambermd.org/201206/0725.html
>
> Thanks a lot for your help,
>
> Marie
>
>
> Dr Marie Brut
> Associate Professor - University of Toulouse
> Atomic-scale Modeling of bio and bio-hybrid systems
>
> LAAS - CNRS
> Team M3 - Multi-scale Modeling of Materials
> 7 Avenue du Colonel Roche
> BP 54200
> 31031 Toulouse Cedex 4
> Phone. : (+33) 5 61 33 63 04
> Fax : (+33) 5 61 33 62 08
> http://www.laas.fr/N2IS/ <http://www.laas.fr/N2IS/>
> https://homepages.laas.fr/mbrut/ <https://homepages.laas.fr/mbrut/drupal/>
>
>
>
>
>
>
>
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Received on Tue Jan 09 2018 - 03:00:02 PST
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