[AMBER] How to estimate Tm of DNA duplex?

From: Xioling Chuang <xioling_c.hotmail.com>
Date: Fri, 29 Jun 2012 10:19:01 +0200

Dear All,

I have run MD simulation of DNA duplex and calculated binding free energy using MMPBSA. I now would like to estimate the melting temperature (Tm) of the duplex. Could anyone guide me? Any reference is welcome.

Best Regards,
Xioling
  
                                               
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Received on Fri Jun 29 2012 - 01:30:03 PDT