Simplest to send your prepc file for comment, also paste leap errors.
Bill
On 12/5/17 2:19 PM, Tarsis wrote:
> Dear Amber users,
>
> I would like to generate parameters for an oligosaccharide containing
> GlcNH3 instead of GlcNAc.
>
> I've tried to generate the prepc file containing the mainchain for the C1
> and O4 head/tail info as well and the mainchain but when I tried to build a
> disaccharide using m = sequence { 4ZB MOL } I get a mismatch atom error.
>
> Is there a simpler way of doing this? Maybe building the whole
> hexasaccharide as one ligand?
>
> Thanks in advance,
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Received on Tue Dec 05 2017 - 14:30:02 PST
