Re: [AMBER] Problems with the "conbine" conmmand in LEaP

From: 杨满意 <ymy0664.163.com>
Date: Sat, 2 Dec 2017 09:23:16 +0800 (CST)

Thanks very much !








At 2017-12-01 20:30:14, "Daniel Roe" <daniel.r.roe.gmail.com> wrote:
>Hi,
>
>You can try using the 'translate' command in leap to move one of the
>units a couple of Angstroms away.
>
>-Dan
>
>On Thu, Nov 30, 2017 at 7:56 PM, 杨满意 <ymy0664.163.com> wrote:
>> Dears:
>> I want to creat a new UNIT mol which consist of UNIT ABC and DEF, So I use the follow command:
>> mol = combine {ABC DEF}
>> But, I found some atoms in UNIT ABC and DEF are overlap in UNIT mol, How can I solve this problem?
>> Is there any other commands in Aamber can avoid this problem?
>> Thanks!
>>
>>
>>
>>
>>
>>
>>
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>
>
>
>--
>-------------------------
>Daniel R. Roe
>Laboratory of Computational Biology
>National Institutes of Health, NHLBI
>5635 Fishers Ln, Rm T900
>Rockville MD, 20852
>https://www.lobos.nih.gov/lcb
>
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Received on Fri Dec 01 2017 - 17:30:03 PST
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