Re: [AMBER] Problems with the "conbine" conmmand in LEaP

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Fri, 1 Dec 2017 08:30:14 -0500

Hi,

You can try using the 'translate' command in leap to move one of the
units a couple of Angstroms away.

-Dan

On Thu, Nov 30, 2017 at 7:56 PM, 杨满意 <ymy0664.163.com> wrote:
> Dears:
> I want to creat a new UNIT mol which consist of UNIT ABC and DEF, So I use the follow command:
> mol = combine {ABC DEF}
> But, I found some atoms in UNIT ABC and DEF are overlap in UNIT mol, How can I solve this problem?
> Is there any other commands in Aamber can avoid this problem?
> Thanks!
>
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-- 
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Fri Dec 01 2017 - 06:00:05 PST
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