Re: [AMBER] error of pdb4amber

From: jacky zhao <jackyzhao010.gmail.com>
Date: Mon, 13 Nov 2017 05:51:19 +0800

Thank you for your immediately reply. The PDB file was attached below:


2017-11-13 0:44 GMT+08:00 Hai Nguyen <nhai.qn.gmail.com>:

> thanks. Sounds like there is issue with ParmEd in parsing 1HAC.pdb.
> Would you mind attaching your pdb file? thanks.
>
> Hai
>
> On Sun, Nov 12, 2017 at 11:03 AM, jacky zhao <jackyzhao010.gmail.com>
> wrote:
>
> > Hi,
> > I have used amber17 for a long time without any problems. Recently, I
> used
> > pdb4amber to prepare the pdb file for further simulation. The error
> occurs.
> > I have attached the error messages below.
> >
> > Anyone can give me some suggestions.
> >
> > Thank you for taking your time.
> >
> > Jacky
> >
> > [image: 内嵌图片 1]
> > --
> > Lei Zhao, Ph.D.
> > International Joint Cancer Institute of the Second Military Medical
> > University
> > National Engineering Research Center for Antibody Medicine
> > New Library Building 11th floor,800 Xiang Yin Road
> > Shanghai 200433
> > P.R.China
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
> _______________________________________________
> AMBER mailing list
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>



-- 
Lei Zhao, Ph.D.
International Joint Cancer Institute of the Second Military Medical
University
National Engineering Research Center for Antibody Medicine
New Library Building 11th floor,800 Xiang Yin Road
Shanghai 200433
P.R.China



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Received on Sun Nov 12 2017 - 14:00:02 PST
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