hi
I think it's due to your network. Please delete the $AMBERHOME/miniconda
folder (if exist) and retry.
Hai
On Thu, Nov 2, 2017 at 7:46 AM, Biplab Ghosh <ghosh.biplab.gmail.com> wrote:
> Dear Amber users,
>
> I was trying to install AmberTools-2017 in Centos-7 (gcc-4.8.5) but getting
> an HTTP error from Miniconda. It says:
>
>
>
> CondaHTTPError: HTTP None None for url <None>
> Elapsed: None
>
> An HTTP error occurred when trying to retrieve this URL.
> ConnectionError(MaxRetryError("HTTPSConnectionPool(host='repo.continuum.io
> ',
> port=443): Max retries exceeded with url:
> /pkgs/free/linux-64/repodata.json.bz2 (Caused by
> NewConnectionError('<requests.packages.urllib3.connection.
> VerifiedHTTPSConnection
> object at 0x2b22dcb8d950>: Failed to establish a new connection: [Errno
> 101] Network is unreachable',))",),)
>
> Problem installing Miniconda... see error above.
> Configure failed due to the errors above!
>
>
>
>
>
> The relevant output is shown below. Can any of you please suggest how to
> get over it?
>
> With regards
> Biplab.
>
> ====================
> Error-logs==============================================================
>
> Should I download and install Miniconda for you? [y/n] y
> Downloading an Amber-compatible Python version 2.7 via Miniconda
> and installing it. This may take several minutes.
>
> ============================================================
> ====================
> This script will download and install a version of Python compatible
> with every component of AmberTools and install all required and optional
> prerequisites. The Python distribution is downloaded for your operating
> system from Miniconda.
>
> Downloading Python 2.7 Miniconda
> Detected Linux kernel. Downloading the Linux installer
> Downloading the latest Miniconda distribution
> Detected 64-bit Linux
> --2017-11-02 16:45:49--
> https://repo.continuum.io/miniconda/Miniconda2-4.3.11-Linux-x86_64.sh
> Connecting to 10.31.31.10:3128... connected.
> Proxy request sent, awaiting response... 200 OK
> Length: 28795989 (27M) [application/x-sh]
> Saving to: ‘miniconda.sh’
>
> 100%[=======================================================
> ===================>]
> 28,795,989 8.31MB/s in 3.6s
>
> 2017-11-02 16:45:53 (7.56 MB/s) - ‘miniconda.sh’ saved [28795989/28795989]
>
> Installing Miniconda Python.
> PREFIX=/software/amber16/miniconda
> installing: python-2.7.13-0 ...
> installing: cffi-1.9.1-py27_0 ...
> installing: conda-env-2.6.0-0 ...
> installing: cryptography-1.7.1-py27_0 ...
> installing: enum34-1.1.6-py27_0 ...
> installing: idna-2.2-py27_0 ...
> installing: ipaddress-1.0.18-py27_0 ...
> installing: libffi-3.2.1-1 ...
> installing: openssl-1.0.2k-0 ...
> installing: pyasn1-0.1.9-py27_0 ...
> installing: pycosat-0.6.1-py27_1 ...
> installing: pycparser-2.17-py27_0 ...
> installing: pyopenssl-16.2.0-py27_0 ...
> installing: readline-6.2-2 ...
> installing: requests-2.12.4-py27_0 ...
> installing: ruamel_yaml-0.11.14-py27_1 ...
> installing: setuptools-27.2.0-py27_0 ...
> installing: six-1.10.0-py27_0 ...
> installing: sqlite-3.13.0-0 ...
> installing: tk-8.5.18-0 ...
> installing: yaml-0.1.6-0 ...
> installing: zlib-1.2.8-3 ...
> installing: conda-4.3.11-py27_0 ...
> installing: pip-9.0.1-py27_1 ...
> installing: wheel-0.29.0-py27_0 ...
> Python 2.7.13 :: Continuum Analytics, Inc.
> creating default environment...
> installation finished.
> WARNING:
> You currently have a PYTHONPATH environment variable set. This may
> cause
> unexpected behavior when running the Python interpreter in Miniconda2.
> For best results, please verify that your PYTHONPATH only points to
> directories of packages that are compatible with the Python interpreter
> in Miniconda2: /software/amber16/miniconda
> Updating and installing required and optional packages...
> Fetching package metadata ...
>
> CondaHTTPError: HTTP None None for url <None>
> Elapsed: None
>
> An HTTP error occurred when trying to retrieve this URL.
> ConnectionError(MaxRetryError("HTTPSConnectionPool(host='repo.continuum.io
> ',
> port=443): Max retries exceeded with url:
> /pkgs/free/linux-64/repodata.json.bz2 (Caused by
> NewConnectionError('<requests.packages.urllib3.connection.
> VerifiedHTTPSConnection
> object at 0x2b22dcb8d950>: Failed to establish a new connection: [Errno
> 101] Network is unreachable',))",),)
>
>
> Problem installing Miniconda... see error above.
> Configure failed due to the errors above!
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
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Received on Thu Nov 02 2017 - 06:00:03 PDT
