Dear Amber users,
I was trying to install AmberTools-2017 in Centos-7 (gcc-4.8.5) but getting
an HTTP error from Miniconda. It says:
CondaHTTPError: HTTP None None for url <None>
Elapsed: None
An HTTP error occurred when trying to retrieve this URL.
ConnectionError(MaxRetryError("HTTPSConnectionPool(host='repo.continuum.io',
port=443): Max retries exceeded with url:
/pkgs/free/linux-64/repodata.json.bz2 (Caused by
NewConnectionError('<requests.packages.urllib3.connection.VerifiedHTTPSConnection
object at 0x2b22dcb8d950>: Failed to establish a new connection: [Errno
101] Network is unreachable',))",),)
Problem installing Miniconda... see error above.
Configure failed due to the errors above!
The relevant output is shown below. Can any of you please suggest how to
get over it?
With regards
Biplab.
====================
Error-logs==============================================================
Should I download and install Miniconda for you? [y/n] y
Downloading an Amber-compatible Python version 2.7 via Miniconda
and installing it. This may take several minutes.
================================================================================
This script will download and install a version of Python compatible
with every component of AmberTools and install all required and optional
prerequisites. The Python distribution is downloaded for your operating
system from Miniconda.
Downloading Python 2.7 Miniconda
Detected Linux kernel. Downloading the Linux installer
Downloading the latest Miniconda distribution
Detected 64-bit Linux
--2017-11-02 16:45:49--
https://repo.continuum.io/miniconda/Miniconda2-4.3.11-Linux-x86_64.sh
Connecting to 10.31.31.10:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 28795989 (27M) [application/x-sh]
Saving to: ‘miniconda.sh’
100%[==========================================================================>]
28,795,989 8.31MB/s in 3.6s
2017-11-02 16:45:53 (7.56 MB/s) - ‘miniconda.sh’ saved [28795989/28795989]
Installing Miniconda Python.
PREFIX=/software/amber16/miniconda
installing: python-2.7.13-0 ...
installing: cffi-1.9.1-py27_0 ...
installing: conda-env-2.6.0-0 ...
installing: cryptography-1.7.1-py27_0 ...
installing: enum34-1.1.6-py27_0 ...
installing: idna-2.2-py27_0 ...
installing: ipaddress-1.0.18-py27_0 ...
installing: libffi-3.2.1-1 ...
installing: openssl-1.0.2k-0 ...
installing: pyasn1-0.1.9-py27_0 ...
installing: pycosat-0.6.1-py27_1 ...
installing: pycparser-2.17-py27_0 ...
installing: pyopenssl-16.2.0-py27_0 ...
installing: readline-6.2-2 ...
installing: requests-2.12.4-py27_0 ...
installing: ruamel_yaml-0.11.14-py27_1 ...
installing: setuptools-27.2.0-py27_0 ...
installing: six-1.10.0-py27_0 ...
installing: sqlite-3.13.0-0 ...
installing: tk-8.5.18-0 ...
installing: yaml-0.1.6-0 ...
installing: zlib-1.2.8-3 ...
installing: conda-4.3.11-py27_0 ...
installing: pip-9.0.1-py27_1 ...
installing: wheel-0.29.0-py27_0 ...
Python 2.7.13 :: Continuum Analytics, Inc.
creating default environment...
installation finished.
WARNING:
You currently have a PYTHONPATH environment variable set. This may cause
unexpected behavior when running the Python interpreter in Miniconda2.
For best results, please verify that your PYTHONPATH only points to
directories of packages that are compatible with the Python interpreter
in Miniconda2: /software/amber16/miniconda
Updating and installing required and optional packages...
Fetching package metadata ...
CondaHTTPError: HTTP None None for url <None>
Elapsed: None
An HTTP error occurred when trying to retrieve this URL.
ConnectionError(MaxRetryError("HTTPSConnectionPool(host='repo.continuum.io',
port=443): Max retries exceeded with url:
/pkgs/free/linux-64/repodata.json.bz2 (Caused by
NewConnectionError('<requests.packages.urllib3.connection.VerifiedHTTPSConnection
object at 0x2b22dcb8d950>: Failed to establish a new connection: [Errno
101] Network is unreachable',))",),)
Problem installing Miniconda... see error above.
Configure failed due to the errors above!
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Received on Thu Nov 02 2017 - 05:00:03 PDT
