Re: [AMBER] AmberTools17 and shape.h

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Thu, 5 Oct 2017 16:53:21 -0700

I should add that xleap is so old-style X11 it *should* be able to run
on centos, once the libs are in place.

Bill


On 10/5/17 4:51 PM, Bill Ross wrote:
> I will add unhelpfully that centos by older reputation and experience at
> least is targeted toward stable server environments - I gave up on using
> it for automated GUI testing, since they were so far behind the curve.
> This was maybe 3 years ago.
>
> Bill
>
>
> On 10/5/17 4:26 PM, Christopher Benjamin Coffey wrote:
>> Thank you for your help David. CentOS is a clone of Red Hat Enterprise linux distro. We need xleap and I have all of those packages installed. I’ll keep trying!
>>
>> Best,
>> Chris
>>
>> —
>> Christopher Coffey
>> High-Performance Computing
>> Northern Arizona University
>> 928-523-1167
>>
>>
>> On Thu, Oct 05, 2017, Christopher Benjamin Coffey wrote:
>> ShapeWidg.c(27): catastrophic error: cannot open source file
>> "X11/extensions/shape.h"
>> #include <X11/extensions/shape.h>
>>
>> First idea: add "-noX11" to the arguments to configure. Then you are set
>> if you don't need xleap.
>>
>> If you do need xleap: we have to figure out what packages might be missing.
>> From the $AMBERHOME/AmberTools/configure2 script, there are these
>> comments:
>>
>> On new Fedora OS's install the libXt-devel libXext-devel"
>> " libX11-devel libICE-devel libSM-devel packages."
>> " On old Fedora OS's install the xorg-x11-devel package."
>> " On RedHat OS's install the XFree86-devel package."
>>
>> Unfortunately, no one has indicated what to do for various versions of CentOS.
>> If it is like "Redhat", then be sure that you have installed the
>> XFree86-devel package.
>>
>> [Developers: can someone with access to CentOS please update this web page:
>>
>> ambermd.org/amber_install.html
>>
>> Please include the exact command to install all needed packages, not just
>> X11-related ones. Also, these package lists can get out of date quickly:
>> if you see any problems with the lists that are already there, please
>> correct them.]
>>
>> ...hope this helps...it *should* be just a matter of identifying the correct
>> packages to install for your flavor of Linux.
>>
>> ....dac
>>
>>
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Received on Thu Oct 05 2017 - 17:00:02 PDT
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