Re: [AMBER] AmberTools17 and shape.h

From: Christopher Benjamin Coffey <Chris.Coffey.nau.edu>
Date: Fri, 6 Oct 2017 18:01:03 +0000

Hi,

Turns out libXext-devel-1.3.3-1.el6.x86_64 was missing even though I thought it was there! We are good now. Thank you for the suggestions and sorry for the simple mistake!

Best,
Chris


Christopher Coffey
High-Performance Computing
Northern Arizona University
928-523-1167
 

On 10/5/17, 4:51 PM, "Bill Ross" <ross.cgl.ucsf.edu> wrote:

    I will add unhelpfully that centos by older reputation and experience at
    least is targeted toward stable server environments - I gave up on using
    it for automated GUI testing, since they were so far behind the curve.
    This was maybe 3 years ago.
    
    Bill
    
    
    On 10/5/17 4:26 PM, Christopher Benjamin Coffey wrote:
> Thank you for your help David. CentOS is a clone of Red Hat Enterprise linux distro. We need xleap and I have all of those packages installed. I’ll keep trying!
>
> Best,
> Chris
>
> —
> Christopher Coffey
> High-Performance Computing
> Northern Arizona University
> 928-523-1167
>
>
> On Thu, Oct 05, 2017, Christopher Benjamin Coffey wrote:
> ShapeWidg.c(27): catastrophic error: cannot open source file
> "X11/extensions/shape.h"
> #include <X11/extensions/shape.h>
>
> First idea: add "-noX11" to the arguments to configure. Then you are set
> if you don't need xleap.
>
> If you do need xleap: we have to figure out what packages might be missing.
> From the $AMBERHOME/AmberTools/configure2 script, there are these
> comments:
>
> On new Fedora OS's install the libXt-devel libXext-devel"
> " libX11-devel libICE-devel libSM-devel packages."
> " On old Fedora OS's install the xorg-x11-devel package."
> " On RedHat OS's install the XFree86-devel package."
>
> Unfortunately, no one has indicated what to do for various versions of CentOS.
> If it is like "Redhat", then be sure that you have installed the
> XFree86-devel package.
>
> [Developers: can someone with access to CentOS please update this web page:
>
> ambermd.org/amber_install.html
>
> Please include the exact command to install all needed packages, not just
> X11-related ones. Also, these package lists can get out of date quickly:
> if you see any problems with the lists that are already there, please
> correct them.]
>
> ...hope this helps...it *should* be just a matter of identifying the correct
> packages to install for your flavor of Linux.
>
> ....dac
>
>
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Received on Fri Oct 06 2017 - 11:30:03 PDT
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