Re: [AMBER] MCPB.py hbay.in input (system does not have metal ion)

From: Rana Rehan Khalid <rrkhalid.umich.edu>
Date: Sat, 16 Sep 2017 15:30:28 -0400

it causing problem if i keep ion related flags blank

On Sat, Sep 16, 2017 at 3:19 PM, Rana Rehan Khalid <rrkhalid.umich.edu>
wrote:

> Our system consist bay60 compound no metal ion is present
>
> can i use this script by keeping ion_ids and ion mol2 blank for producing
> input files for go9.
>
>
> original_pdb hbay_H_renum.pdb
> group_name hbay
> cut_off 2.8
> ion_ids
> software_version g09
> ion_mol2files
> naa_mol2files 1DX.mol2
> frcmod_files 1DX.frcmod
>
>
> Thanks
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Sep 16 2017 - 13:00:03 PDT
Custom Search