Re: [AMBER] Rebuilt missing amino acid gap is critical for long-time MD simulation by Amber

From: Carlos Simmerling <carlos.simmerling.gmail.com>
Date: Fri, 8 Sep 2017 10:39:14 -0400

I think people may not be understanding your question. Try to describe
exactly what you did and what happened, or maybe get help from someone that
can help you develop a more clear explanation.

On Sep 8, 2017 10:29 AM, "jacky zhao" <jackyzhao010.gmail.com> wrote:

> opps,
> No one can answer this question?:)
>
>
>
> jacky zhao <jackyzhao010.gmail.com>于2017年9月5日 周二下午1:00写道:
>
> > Hi everyone
> > Recently, I have performed protein-protein complex long-time MD
> > simulation with more than 1µs by Amber. I am wondering that rebuilt the
> > missing amino acid gap is essential for long-time MD simulation, even
> > though these missing amino acids were not located at the binding
> interface?
> >
> >
> > Thank you for taking your time.
> >
> >
> >
> > --
> > Lei Zhao, Ph.D.
> > International Joint Cancer Institute of the Second Military Medical
> > University
> > National Engineering Research Center for Antibody Medicine
> > New Library Building 11th floor,800 Xiang Yin Road
> > Shanghai 200433
> > P.R.China
> >
> --
> Lei Zhao, Ph.D.
> International Joint Cancer Institute of the Second Military Medical
> University
> National Engineering Research Center for Antibody Medicine
> New Library Building 11th floor,800 Xiang Yin Road
> Shanghai 200433
> P.R.China
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>
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Received on Fri Sep 08 2017 - 08:00:02 PDT
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