Ok.
For converting files to amber compatible files from gromacs, you can use gromber command on Parmed.
I am sorry I do not recollect any tutorial files. But In Parmed just type "gromber" and you should see how to run that.
Best Regards
Elvis Martis
Mumbai, INDIA.
________________________________________
From: Mohammad Zahidul Hossain Khan <za.parash.gmail.com>
Sent: 12 August 2017 00:47
To: AMBER Mailing List
Subject: Re: [AMBER] SASA energy
Dear Sir
I know but I need the link or tutorial for SASA energy. I am gromaces user
so I need to convert my files also
On Fri, Aug 11, 2017 at 12:06 PM, Elvis Martis <elvis.martis.bcp.edu.in>
wrote:
> HI,
> you can use cpptraj, using the command "surf"
>
> Best Regards
> Elvis Martis
> Mumbai, INDIA.
>
> ________________________________________
> From: Mohammad Zahidul Hossain Khan <za.parash.gmail.com>
> Sent: 11 August 2017 22:47
> To: amber.ambermd.org
> Subject: [AMBER] SASA energy
>
> Does anyone know how to measure solvent accessible surface area energy
> using amber.
>
> --
>
>
> *Mohammad Zahidul Hossain Khan Graduate student**Department of Physics*
> *Email: khan5121.vandals.uidaho.edu <khan5121.vandals.uidaho.edu>*
> * Skype: parash.khan2*
> *Cell: +12085967165*
> _______________________________________________
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>
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> http://lists.ambermd.org/mailman/listinfo/amber
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--
*Mohammad Zahidul Hossain Khan Graduate student**Department of Physics*
*Email: khan5121.vandals.uidaho.edu <khan5121.vandals.uidaho.edu>*
* Skype: parash.khan2*
*Cell: +12085967165*
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Received on Fri Aug 11 2017 - 20:30:02 PDT
