Re: [AMBER] parmchk2 closing loop error

From: David Case <david.case.rutgers.edu>
Date: Fri, 14 Jul 2017 20:45:00 -0400

On Fri, Jul 14, 2017, CA gmail wrote:
>
> I'm trying to figure out if and what parameters might be missing from my
> prep-file for modified nucleic acids, but parmchk2 (and parmchk) are giving
> me the same error message: 'Invalid atom name (C3') in the LOOP section.'

First, we would have to see the "*.prep" file you mention to be of much help.

But second, just go ahead and run tleap: it will tell you which parameters are
missing.

....dac


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Received on Fri Jul 14 2017 - 18:00:04 PDT
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