Re: [AMBER] Problem with running mdout_analyzer.py

From: Krantzman, Kristin D <KrantzmanK.cofc.edu>
Date: Wed, 12 Jul 2017 22:55:41 +0000

Hi Bill,
Python is automatically installed when I type "make install" with AmberTools16. I do not know how to find the configuration file that has the error.
Kristin

-----Original Message-----
From: Bill Ross [mailto:ross.cgl.ucsf.edu]
Sent: Wednesday, July 12, 2017 6:45 PM
To: amber.ambermd.org
Subject: Re: [AMBER] Problem with running mdout_analyzer.py

Correction - not a broken install, but a broken config that is concatenating names instead of choosing one.

Bill


On 7/12/17 3:43 PM, Bill Ross wrote:
> > /opt/anaconda1anaconda2anaconda3/lib/tcl8.5
>
> That path sure looks like a broken install, but I don't know anything
> about anaconda.
>
> Bill
>
> On 7/12/17 3:40 PM, Krantzman, Kristin D wrote:
>> Greetings AMBER users,
>> I am trying to run mdout_analyzer.py and get the following error:
>> Traceback (most recent call last):
>> File "./mdout_analyzer.py", line 48, in <module>
>> root = Tk()
>> File "/usr/local/amber16/miniconda/lib/python2.7/lib-tk/Tkinter.py", line 1820, in __init__
>> self.tk = _tkinter.create(screenName, baseName, className,
>> interactive, wantobjects, useTk, sync, use)
>> _tkinter.TclError: Can't find a usable init.tcl in the following directories:
>> /opt/anaconda1anaconda2anaconda3/lib/tcl8.5
>> /usr/local/amber16/lib/tcl8.5 /usr/local/lib/tcl8.5 /usr/local/amber16/library /usr/local/library /usr/local/tcl8.5.18/library /usr/tcl8.5.18/library I reinstalled tcl, I still get this error. Could you help with this?
>> Best, Kristin
>>
>>
>> This probably means that Tcl wasn't installed properly.
>> Kristin D. Krantzman
>> Professor, Department of Chemistry and Biochemistry College of
>> Charleston Charleston, SC 29424
>> (843) 953-3378
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.ambermd.org
>> _mailman_listinfo_amber&d=DwICAg&c=7MSSWy9Bs2yocjNQzurxOQ&r=rDr-VDoXC
>> Kpr5ouXXYSZkHF6q5gU19w8m7W8WZccZ7U&m=05GA69kYpADyAfYrZgotQ_jPUCJfvrw7
>> ZdtuDC7nbNI&s=v8nAsRTANLujksAhkfYwDGyLppXkweYL1R6TmLUC-7w&e=
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.ambermd.org_
> mailman_listinfo_amber&d=DwICAg&c=7MSSWy9Bs2yocjNQzurxOQ&r=rDr-VDoXCKp
> r5ouXXYSZkHF6q5gU19w8m7W8WZccZ7U&m=05GA69kYpADyAfYrZgotQ_jPUCJfvrw7Zdt
> uDC7nbNI&s=v8nAsRTANLujksAhkfYwDGyLppXkweYL1R6TmLUC-7w&e=


_______________________________________________
AMBER mailing list
AMBER.ambermd.org
https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.ambermd.org_mailman_listinfo_amber&d=DwICAg&c=7MSSWy9Bs2yocjNQzurxOQ&r=rDr-VDoXCKpr5ouXXYSZkHF6q5gU19w8m7W8WZccZ7U&m=05GA69kYpADyAfYrZgotQ_jPUCJfvrw7ZdtuDC7nbNI&s=v8nAsRTANLujksAhkfYwDGyLppXkweYL1R6TmLUC-7w&e=

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Jul 12 2017 - 16:00:06 PDT
Custom Search