Thank you, sir, for your kind response. I have already calculated RDF (Radial Distribution Function) for my system. Bt now I want to calculate SDF (Spatial Distribution Function) of this system. In gromacs, there are two separate commands for RDF g_rdf and SDF g_spatial. Is there any command for SDF in amber?
Thanks and regards,Saikat
On Wednesday 12 July 2017, 6:40:35 PM IST, Daniel Roe <daniel.r.roe.gmail.com> wrote:
The radial distribution function can be calculated via the ''radial'
command in cpptraj.
-Dan
On Wed, Jul 12, 2017 at 9:06 AM, Saikat Pal <saikatpaliitg.yahoo.com> wrote:
> Dear all,
> I want to calculate SDF (Spatial Distribution Function) in amber.Is it possible in amber??
> Thanks and regards,
> Saikat Pal
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--
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Wed Jul 12 2017 - 07:30:05 PDT
