Re: [AMBER] Is there any analysis of the stability of DNA in presence of Divalent cation??

From: David Case <david.case.rutgers.edu>
Date: Thu, 29 Jun 2017 11:09:04 -0600

On Thu, Jun 29, 2017, Saikat Pal wrote:

> Is there any analysis of the stability of DNA in presence of Divalent
> cation (Mainly Strontium Sr+2) in water, in Amber ??

We've done some Sr2+ / DNA calculations:

%A H.T. Nguyen
%A S.A. Pabit
%A L. Pollack
%A D.A. Case
%T Extracting water and ion distributions from solution x-ray scattering
experiments
%J J. Chem. Phys.
%V 144
%P 214105
%D 2016

These studies have nothing to do with "stability" (e.g. with melting
temperatures), but might help you get started.

....dac


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Received on Thu Jun 29 2017 - 10:30:02 PDT
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