Dear all,
I always use h++ program to process my PDB before simulation and I use
ambpdb to convert top and crd file from h++ to create new PDB for
simulation. I never had any problem until now. The protein complex I am
trying to process has four chains with total of 473 amino acid. I processed
through h++ without any problem. But when I use ambpdb -p top -c crd >
final.pdb, I get segmentation fault, core dumped message.
Any idea on how to proceed on this? Also, if you could suggest few other
sites/program that helps me to process PDB (like protonation state, flip
and all that) I would be very grateful.
Thank you
Jag
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Jun 28 2017 - 05:30:03 PDT
