[AMBER] External electric fields support for GPU and how to set the parameters in mdin files?

From: Jianing Song <sjn_sk.hotmail.com>
Date: Wed, 7 Jun 2017 04:49:45 +0000

Dear all,

Would you please tell me whether AMBER16 supports external electric fields in GPU now?

I want to simulate a membrane protein located in a lipid bilayer, and try to add external electric field only to the Z axis. Then the periodicity of the system should be only set to X and Y axis, not Z axis, Is this right?
If right, would you please tell me how to set the parameters efphase and effreq in the mdin files?

Thanks very much.

Jianing
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Received on Tue Jun 06 2017 - 22:00:04 PDT