Dear Amber users,
How can I calculate the center of mass of a molecule from trajectory file (mdcrd)?
If I have a system consisting of DNA and Ion, I want to calculate Radial distribution plot of Particular One residue like the center of mass of guanine with the ion.Is it possible?.
In Amber 2015 manual page no 546 there is a command for the center of mass. If I use this command can I get the center of mass trajectory file for a particular atom ??
please help me out .
Thank you
Saikat Pal
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Received on Tue Jun 06 2017 - 08:00:02 PDT
