Sounds like you install pytraj before (with libcpptraj) and for some reason, pytraj in amber was linked to incompatible libcpptraj.
Try
cd $HOME
find . - name libcpptraj.so
then delete the libcpptraj.so
Do the amber install again.
I suggest to install ambertools 17 since we handle above issue better.
Good luck.
Hai
> On May 23, 2017, at 9:26 AM, Vidhya Srivatsan <vidhyasri1609.gmail.com> wrote:
>
> Hello
> I am first time user and I receive the following error from installation of
> amber package..
> (amber16)
>
>
> I have done ./configure_python and ./configure. Both steps were successful.
> I also sourced amber.sh
>
> When i run "make install" , I get this
>
> pytraj/cpp_options.cpp: In function ‘PyObject* __pyx_pf_6pytraj_11cpp_
> options_2set_error_silent(PyObject*, PyObject*)’:
> pytraj/cpp_options.cpp:803:28: error: ‘SupressErrorMsg’ was not declared in
> this scope
> SupressErrorMsg(__pyx_t_1);
> ^
> error: command 'gcc' failed with exit status 1
> Makefile:508: recipe for target 'pytraj' failed
> make[2]: *** [pytraj] Error 1
>
>
> Kindly help me out.
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Received on Tue May 23 2017 - 07:00:02 PDT
