Re: [AMBER] Problem with parmed

From: Hannes Loeffler <Hannes.Loeffler.stfc.ac.uk>
Date: Wed, 17 May 2017 11:08:37 +0100

On Wed, 17 May 2017 12:00:42 +0200
Qinghua Liao <scorpio.liao.gmail.com> wrote:

> Normally, it works fine. But now, I want to apply some distance
> restraints between atoms from the two monomers, respectively.

I don't know about ParmEd but as far as Gromacs goes you can do exactly
that with modern versions of the software. Check the manual for
[ intermolecular_interactions]


Cheers,
Hannes.

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Received on Wed May 17 2017 - 03:30:03 PDT
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