Re: [AMBER] AmberTools17 + intel17 = bug

From: Hector A. Baldoni <hbaldoni.unsl.edu.ar>
Date: Tue, 18 Apr 2017 20:30:05 -0300 (ARGSL-ST)

Dear Sirs,

Sorry but a single vim ":%s/openmp/qopenmp/g" over the config.h make the
trick.

Greeting,
Hector.



> Dear Sirs,
>
> I was trying to compile the AmberTools17 whith the Intel(R) Parallel
> Studio XE Cluster Edution for Linux, Version 17.0.3.191 Build 20170404
> compiler, however in such compiler the -openmpi option is deprecated and
> replaced by “–qopenmp” and the compiler complains with the following
> error:
>
> ================================================================
> ./configure -noX11 -qopenmp -intelmpi intel
> Checking for updates...
> Checking for available patches online. This may take a few seconds...
> Available AmberTools 17 patches:
> No patches available
> Available Amber 16 patches:
> No patches available
> Error: Unknown or misplaced flag: -qopenmp
> Usage: ./configure [flags] compiler
> Type './configure -help' for more details.
> Configure failed due to the errors above!
> ================================================================
>
> Would you please add an appropriated bug fix to circumvent such error.
>
> Best Regards,
> Hector.
>
> --------------------------------------
> Dr. Hector A. Baldoni
> Profesor Adjunto (FQByF-UNSL)
> Investigador Adjunto (IMASL-CONICET)
> Area de Quimica General e Inorganica
> Universidad Nacional de San Luis
> Chacabuco 917 (D5700BWS)
> San Luis - Argentina
> hbaldoni at unsl dot edu dot ar
> Tel.:+54-(0)266-4520300 ext. 6157
> --------------------------------------
> -.First thinghs first, but not necesarily in that order.-
>
> -.The theoretical approach these days can predict/show almost anything,
> but the ultimate truth lies in the experiment.-
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>


--------------------------------------
 Dr. Hector A. Baldoni
 Profesor Adjunto (FQByF-UNSL)
 Investigador Adjunto (IMASL-CONICET)
 Area de Quimica General e Inorganica
 Universidad Nacional de San Luis
 Chacabuco 917 (D5700BWS)
 San Luis - Argentina
 hbaldoni at unsl dot edu dot ar
 Tel.:+54-(0)266-4520300 ext. 6157
--------------------------------------
-.First thinghs first, but not necesarily in that order.-

-.The theoretical approach these days can predict/show almost anything,
but the ultimate truth lies in the experiment.-


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Received on Tue Apr 18 2017 - 17:00:03 PDT
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