Re: [AMBER] [MTKPP & pmemd error]: Installation of Amber 12 with Amber-too13 on Fedora25-64bit

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Fri, 17 Mar 2017 23:55:50 -0700

Why not try the latest Amber Tools version? The old ones couldn't
foresee modern configurations.

Bill


On 3/17/17 11:33 PM, Vasantha Kumar wrote:
> Dear Amber-list
>
> I m trying to install Amber12 with Amber-tool13 on a Fedora 25 64bit laptop
> with intel support. I can run ./configure gnu, everything goes well, but
> when I run "make install or make -j install" it shows an error with mtkpp.
> I have tried to run "./configure -nomtkpp gnu" still I have the same
> problem. When I run make test it launches the test and it fails to perform
> full comparison of files. Therefore could any one suggest me troubleshoot
> this issue. I highly appreciate your time and suggestions.
>
> With best wishes
> Vince
>
>
> Error after running make install
> _________________________________
>
> cd AmberTools/src && make install
> make[1]: Entering directory '/home/J55/Programs/amber12/AmberTools/src'
> Starting installation of MTK++ at Sat Mar 18 02:04:15 EDT 2017.
> (cd mtkpp && make && make -j 1 install )
> make[2]: Entering directory
> '/home/J55/Programs/amber12/AmberTools/src/mtkpp'
> make all-recursive
> make[3]: Entering directory
> '/home/J55/Programs/amber12/AmberTools/src/mtkpp'
> Making all in src
> make[4]: Entering directory
> '/home/J55/Programs/amber12/AmberTools/src/mtkpp/src'
> Making all in Diagnostics
> make[5]: Entering directory
> '/home/J55/Programs/amber12/AmberTools/src/mtkpp/src/Diagnostics'
> /bin/sh ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I.
> -I../.. -I/home/J55/Programs/amber12/AmberTools/src/boost-1.38.0 -I./..
> -DNDEBUG -DUSE_TINYXML -DTIXML_USE_STL -DC99_OK -O2 -fPIC -DHAVE_ZLIB -MT
> MTKException.lo -MD -MP -MF .deps/MTKException.Tpo -c -o MTKException.lo
> MTKException.cpp
> libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../..
> -I/home/J55/Programs/amber12/AmberTools/src/boost-1.38.0 -I./.. -DNDEBUG
> -DUSE_TINYXML -DTIXML_USE_STL -DC99_OK -O2 -fPIC -DHAVE_ZLIB -MT
> MTKException.lo -MD -MP -MF .deps/MTKException.Tpo -c MTKException.cpp -o
> MTKException.o
> Makefile:339: recipe for target 'MTKException.lo' failed
> make[5]: Leaving directory
> '/home/J55/Programs/amber12/AmberTools/src/mtkpp/src/Diagnostics'
> Makefile:282: recipe for target 'all-recursive' failed
> make[4]: Leaving directory
> '/home/J55/Programs/amber12/AmberTools/src/mtkpp/src'
> Makefile:389: recipe for target 'all-recursive' failed
> make[3]: Leaving directory '/home/J55/Programs/amber12/AmberTools/src/mtkpp'
> Makefile:298: recipe for target 'all' failed
> make[2]: Leaving directory '/home/J55/Programs/amber12/AmberTools/src/mtkpp'
> Makefile:106: recipe for target 'install_mtkpp' failed
> make[1]: Leaving directory '/home/J55/Programs/amber12/AmberTools/src'
> Makefile:7: recipe for target 'install' failed
> _______________________________________________
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Received on Sat Mar 18 2017 - 00:00:02 PDT
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