[AMBER] A problem about the frcmod produced by ParmChk

From: JinpengYang <1507110130.csu.edu.cn>
Date: Tue, 14 Mar 2017 09:07:16 +0800 (GMT+08:00)

Dear professor:

    When I used ParmChk to generate the frcmod file of molecule.A problem came out as below:

    The frcmod file produced by Parmchk: CA-CA-CA-HA 1 6.650 180.000 2.000 same as X -
c2-c2-X
    When I check gaff.dat,the corresponding parameters of the dihedral angle is:

X -c2-c2-X 4 26.600 180.000 2.000 c2=c2 double bond, intrpol.bsd.on C6H6

    Why is the parameter different ? Your any advise will help me a lot.

All the regards,

Jinpeng Yang
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Received on Mon Mar 13 2017 - 18:30:02 PDT
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