[AMBER] hydophobic

From: Thakur, Abhishek <axt651.miami.edu>
Date: Thu, 9 Mar 2017 20:28:58 +0000

Hi,

I need an advice.

I have two conformer of ligand binding to my system, one conformer is having a very good binding affinity (MM-PBSA) in comparison with other.

I am thinking that best binder is moving to hydrophobic region,

Can any one guide me how to check that binding region is hydrophobic or not.



With regards,

AT
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Received on Thu Mar 09 2017 - 12:30:03 PST
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