Re: [AMBER] visualization problem

From: Adrian Roitberg <roitberg.ufl.edu>
Date: Tue, 31 Jan 2017 12:24:42 -0500

Dan is correct, you need vmd >= 1.9.3


On 1/31/17 12:22 PM, Daniel Roe wrote:
> Hi,
>
> I think only version 1.9.3 of VMD supports reading the NetCDF restart
> format. You can upgrade, or convert your NetCDF restart (e.g.
> inpcrd.ncrst) to ASCII restart with cpptraj:
>
> cpptraj -p myparm.parm7 -y inpcrd.ncrst -x inpcrd.rst7
>
> Hope this helps,
>
> -Dan
>
> On Tue, Jan 31, 2017 at 11:09 AM, Albert <mailmd2011.gmail.com> wrote:
>> Hello,
>>
>>
>> I've loaded my sol.prmtop and sol.inpcrd file into VMD successfully. I
>> can see my water box without any problem.
>>
>>
>> However, when I try to load a .rst restart file or .mdcrd trajectory
>> file to VMD, VMD always stacks with information:
>>
>> Info) rst7plugin) Title: CDF
>>
>> The system halted. I am just wondering how to solve the problem? I am
>> using VMD 1.9.2
>>
>> Thanks a lot
>>
>> Albert
>>
>>
>>
>>
>> _______________________________________________
>> AMBER mailing list
>> AMBER.ambermd.org
>> http://lists.ambermd.org/mailman/listinfo/amber
>
>

-- 
Dr. Adrian E. Roitberg
University of Florida Research Foundation Professor.
Department of Chemistry
University of Florida
roitberg.ufl.edu
352-392-6972
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Received on Tue Jan 31 2017 - 09:30:03 PST
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