It was a bug, now fixed in GitHub. Let me know if you still see
strangeness. Thanks for the report.
-Dan
On Thu, Jan 19, 2017 at 8:22 AM, Daniel Roe <daniel.r.roe.gmail.com> wrote:
> Programs should never segfault, so no matter what is going on it
> sounds like a bug. I'll take a look. Thanks,
>
> -Dan
>
> On Thu, Jan 19, 2017 at 7:58 AM, Thomas Fox <thomas_fox.gmx.net> wrote:
>>
>> Hi,
>>
>> Im having a problem with cpptraj and the list command after having cleared
>> datasets: cpptraj throws a segfault or aborts.
>> This seems to be a problem with dihedral datasets, when I do a rms instead
>> of the dihedral command, things work fine.
>>
>> I first noticed that with cpptraj15, so I downloaded the current version
>> from git yesterday and compiled it with
>> ./configure gnu –amberlib; make
>> My system is Scientific Linux 6.6
>>
>> I have attached sample input files (parmtop, trajectory, ccptraj-command
>> files) as well as the output files, both from cpptraj 15 and 17.
>> cptin.ok works fine, ctpin.seqflt has an additional “clear datasets” command
>> followed by “list” which causes cpptraj to crash.
>>
>> Can you reproduce this behavior? Is this a real problem or I do something
>> completely stupid?
>>
>> Thanks a lot,
>> Th.
>>
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>> http://lists.ambermd.org/mailman/listinfo/amber
>>
>
>
>
> --
> -------------------------
> Daniel R. Roe
> Laboratory of Computational Biology
> National Institutes of Health, NHLBI
> 5635 Fishers Ln, Rm T900
> Rockville MD, 20852
> https://www.lobos.nih.gov/lcb
--
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Thu Jan 19 2017 - 07:00:02 PST
