Programs should never segfault, so no matter what is going on it
sounds like a bug. I'll take a look. Thanks,
-Dan
On Thu, Jan 19, 2017 at 7:58 AM, Thomas Fox <thomas_fox.gmx.net> wrote:
>
> Hi,
>
> Im having a problem with cpptraj and the list command after having cleared
> datasets: cpptraj throws a segfault or aborts.
> This seems to be a problem with dihedral datasets, when I do a rms instead
> of the dihedral command, things work fine.
>
> I first noticed that with cpptraj15, so I downloaded the current version
> from git yesterday and compiled it with
> ./configure gnu –amberlib; make
> My system is Scientific Linux 6.6
>
> I have attached sample input files (parmtop, trajectory, ccptraj-command
> files) as well as the output files, both from cpptraj 15 and 17.
> cptin.ok works fine, ctpin.seqflt has an additional “clear datasets” command
> followed by “list” which causes cpptraj to crash.
>
> Can you reproduce this behavior? Is this a real problem or I do something
> completely stupid?
>
> Thanks a lot,
> Th.
>
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>
--
-------------------------
Daniel R. Roe
Laboratory of Computational Biology
National Institutes of Health, NHLBI
5635 Fishers Ln, Rm T900
Rockville MD, 20852
https://www.lobos.nih.gov/lcb
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Received on Thu Jan 19 2017 - 05:30:02 PST
