Re: [AMBER] csh to bash

From: Nhai <nhai.qn.gmail.com>
Date: Thu, 12 Jan 2017 12:18:44 -0500

Please check here

http://tldp.org/LDP/Bash-Beginners-Guide/html/x7369.html

Or google 'csh vs bash'

Hai Nguyen

> On Jan 12, 2017, at 12:11 PM, Thakur, Abhishek <axt651.miami.edu> wrote:
>
> Hi everyone
>
> I was running my production on csh but it was giving me some error. So I have tested same script of bash and it is running fine.
>
> So I need some help in converting few lines of my script from csh to bash
>
>
>
>
> # Set job name and current dir
> set user = axt651
> set jobname = PRMT1-PROD
> set local = /projects/chem/ionic/abhi/M86K-F204D/prod
>
> set amber = $AMBERHOME/bin/pmemd.cuda
>
>
> # Copy AMBER files to scratch dir
> mkdir /scratch/projects/prmt/$user
> mkdir /scratch/projects/prmt/$user/$jobname
> cd /scratch/projects/prmt/$user/$jobname
>
>
>
> Thanking you,
> Abhishek
>
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Received on Thu Jan 12 2017 - 09:30:03 PST
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