Dear Amber experts,
I have four GTX 1080 in my server (Linux CentOS) with Amber 16 and AmberTools 16.
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 367.48 Driver Version: 367.48 |
|-------------------------------+----------------------+----------------------+
| GPU Name Persistence-M| Bus-Id Disp.A | Volatile Uncorr. ECC |
| Fan Temp Perf Pwr:Usage/Cap| Memory-Usage | GPU-Util Compute M. |
|===============================+======================+======================|
| 0 GeForce GTX 1080 Off | 0000:02:00.0 On | N/A |
| 27% 29C P8 6W / 180W | 58MiB / 8113MiB | 0% Default |
+-------------------------------+----------------------+----------------------+
| 1 GeForce GTX 1080 Off | 0000:03:00.0 Off | N/A |
| 27% 31C P8 6W / 180W | 1MiB / 8113MiB | 0% Default |
+-------------------------------+----------------------+----------------------+
| 2 GeForce GTX 1080 Off | 0000:82:00.0 Off | N/A |
| 27% 27C P8 6W / 180W | 1MiB / 8113MiB | 0% Default |
+-------------------------------+----------------------+----------------------+
| 3 GeForce GTX 1080 Off | 0000:83:00.0 Off | N/A |
| 27% 31C P8 6W / 180W | 1MiB / 8113MiB | 0% Default |
+-------------------------------+----------------------+----------------------+
I failed testing cuda.
I have followed the guidance in AMBER16 manual for cuda installation:
cd $AMBERHOME
./configure -cuda gnu
make install
The cuda installation completed smoothly.
See below the end of the system report:
Installation of pmemd.cuda complete
make[2]: Leaving directory `/var/spool/scratch/shokhen/amber16/src/pmemd'
make[1]: Leaving directory `/var/spool/scratch/shokhen/amber16/src'
Unfortunately the test command reported error:
[enzyme03] shokhen 542 : make test.cuda
make: *** No rule to make target `test.cuda'. Stop.
I would appreciate for any advice how to fix the problem
in cuda test running.
Thank you,
Michael
*****************************
Michael Shokhen, PhD
Associate Professor
Department of Chemistry
Bar Ilan University,
Ramat Gan, 52900
Israel
email: shokhen.mail.biu.ac.il<https://webmail.biu.ac.il/owa/redir.aspx?C=a160ef9b9a6b4d06992402715d3ee465&URL=mailto%3ashokhen%40mail.biu.ac.il>
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Received on Sun Dec 25 2016 - 11:00:02 PST
