Re: [AMBER] solvatebox command

From: David A Case <>
Date: Thu, 22 Dec 2016 08:11:12 -0500

On Thu, Dec 22, 2016, Mohaddeseh Habibzadeh wrote:

> I used "solvatebox" command in order to make a rectangular box, but it
> makes cubic box with large amount of water residues.
> I'm trying to make a box which fit my molecule (it's long strand form)
> with fewer water residues.
> Is there any way to change the box dimensions?

typing "help solvatebox" at the xleap or tleap command line gives lots of
information. Does that help? Note that solvatebox does not create cubic
boxes, but rather does what you say you want....


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Received on Thu Dec 22 2016 - 05:30:02 PST
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