[AMBER] AmberTools16 installation problem

From: <a.jarmula.nencki.gov.pl>
Date: Mon, 12 Dec 2016 13:19:52 +0100

  Dear Amber users,

I got a problem with the installation of AmberTools16 on Linux Ubuntu
16.04. Initially everything went well and according to the instructions
in Amber 2016 Reference Manual. AMBERHOME environment variable was set
up and configure was generated with ./configure gnu. At this step,
updates and bug fixes have been applied. Make install was not
successful, however, and the following errors were reported at the end:

Error: Scalar INTEGER expression expected at (1)
getopts_c.F90:592:18:
character(len=length),pointer,dimension(:) :: get_c_pt
1
Error: Scalar INTEGER expression expected at (1)
getopts_c.F90:588:2:
function get_c_pt(key, type,length)! result(value)
1
Error: Function result 'get_c_pt' at (1) has no IMPLICIT type
getopts_c.F90:600:54:
if(associated(get_c_pt)) deallocate(get_c_pt)
1
Error: Allocate-object at (1) is not a nonprocedure pointer nor an
allocatable variable
getopts_c.F90:588:29:
function get_c_pt(key, type,length)! result(value)
1
Error: Symbol 'type' at (1) has no IMPLICIT type
depend:169: polecenia dla obiektu 'getopts_c.o' nie powiodly sie
make[3]: *** [getopts_c.o] Blad 1
make[3]: Opuszczenie katalogu '/home/monika/amber16/AmberTools/src/rism'
Makefile:475: polecenia dla obiektu 'librism' nie powiodly sie
make[2]: *** [librism] Blad 2
make[2]: Opuszczenie katalogu
'/home/monika/amber16/AmberTools/src/sander'
Makefile:17: polecenia dla obiektu 'serial' nie powiodly sie
make[1]: *** [serial] Blad 2
make[1]: Opuszczenie katalogu '/home/monika/amber16/AmberTools/src'
Makefile:7: polecenia dla obiektu 'install' nie powiodly sie
make: *** [install] Blad 2

The Polish parts listed above mean, for example:

depend:169: commands for object 'getopts_c.o' failed
make[3]: *** [getopts_c.o] Error 1
make[3]: Leaving directory '/home/monika/amber16/AmberTools/src/rism'

  Any help would be appreciated,
  Adam Jarmula


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Received on Mon Dec 12 2016 - 04:30:03 PST
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