I was thinking on fixing the first and last base pairs and using an
external force in order to make the helix become a stair. Is it possible to
define external forces?
On Sun, Dec 11, 2016 at 9:12 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:
> E.g. high temperature is pretty easy to accomplish.
>
> Bill
>
>
> On 12/11/16 6:05 PM, David A Case wrote:
> > On Sun, Dec 11, 2016, The Cromicus Productions wrote:
> >> I want to simulate the untwisting of a DNA molecule. Is this possible
> with
> >> AMBER?
> > You would have to decide what physical or artifical forces were driving
> the
> > untwisting. The model those forces.
> >
> > ....dac
> >
> >
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Received on Sun Dec 11 2016 - 18:30:03 PST
