[AMBER] Questions regarding Installation of AMBER 16

From: James Kress <jimkress_58.kressworks.org>
Date: Sun, 11 Dec 2016 16:07:50 -0500

Question 1:

 

Just installed AMBER 16 using:

 

./configure gnu

 

Serial installation went fine. The Test went fine except it failed for
cases in:

 

U:\home\amber16\AmberTools\src\FEW\examples\test\gauss\L51a

 

U:\home\amber16\AmberTools\src\FEW\examples\test\leap\L51a

 

U:\home\amber16\AmberTools\src\FEW\examples\test\MD_resp\L51a

 

Failure was in that order. I assume this is not an issue since I do not
have Gaussian installed so the associated QM and other calculations could
not be performed.

 

Question 2:

 

I then did

 

make clean

./configure -mpi gnu

 

After making sure the openmpi 10 ldlibrary and path were properly included.

 

Everything went fine except I was given a warning about the absence of
parallel NetCDF. I searched the AMBER 16 distribution but could find no
trace of pnetcdf. Do I need to install this separately?

 

Thanks.

 

Jim Kress

 

James Kress Ph.D., President

The KressWorksR Institute

An IRS Approved 501 (c)(3) Charitable, Nonprofit Corporation

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Received on Sun Dec 11 2016 - 13:30:02 PST
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