Re: [AMBER] recipe for target "parallel" failed

From: Elvis Martis <elvis_bcp.elvismartis.in>
Date: Sun, 27 Nov 2016 13:44:51 +0530

​Yes.
All the Best.​

Regards

*Elvis Martis* Ph.D. Student, Bombay College of Pharmacy
[image: photo] Email: elvis_bcp.elvismartis.in <elvis_bcp.elvismartis.in>
Website: http://www.elvismartis.in <http://www.elvismartis.in/>
group website: http://www.profeccoutinho.net.in/
Address:

 Kalina, Santa Cruz [E]
​, Mumbai, 400 098, INDIA​

Alt. e-mail: emartis12.live.com
<https://in.linkedin.com/in/elvisadrianmartis>


On 27 November 2016 at 13:37, Mohaddeseh Habibzadeh <
m.habibzadeh.azaruniv.edu> wrote:

> [image: Boxbe] <https://www.boxbe.com/overview> This message is eligible
> for Automatic Cleanup! (m.habibzadeh.azaruniv.edu) Add cleanup rule
> <https://www.boxbe.com/popup?url=https%3A%2F%2Fwww.boxbe.com%2Fcleanup%3Fkey%3DlOHv7QfW9GSeQFOsyHEizT9PsXbyBoi0AJCngElTxpQ%253D%26token%3Dxa1r9NuOa%252FfN6tUyjJ7QoBfN2zNlmaNDUkE%252BFyrmT%252BCnOcXBoh2PrQIm9N3AmotaxO78KUZsi7F7%252FSgMSp96J2rC89KUlTU2WV5hBXBShqvXyjQGjPTSGomj9oMj9Te10JsSm2%252BAfSDoWrftY3XkQA%253D%253D&tc_serial=27757954322&tc_rand=375626128&utm_source=stf&utm_medium=email&utm_campaign=ANNO_CLEANUP_ADD&utm_content=001>
> | More info
> <http://blog.boxbe.com/general/boxbe-automatic-cleanup?tc_serial=27757954322&tc_rand=375626128&utm_source=stf&utm_medium=email&utm_campaign=ANNO_CLEANUP_ADD&utm_content=001>
>
> Great. Then I have to change the AMBERHOME's directory to amber16.
> Not keeping both together.
> In this way sander woks with amber16 and pmemd works with amber14.
> Best regards
>
> On Sun, 11/27/2016 02:13 AM, Elvis Martis <elvis_bcp.elvismartis.in>
> wrote:
> > Hi,
> > You can see Jason's page for this.
> > http://jswails.wikidot.com/installing-ambertools-14-and-older-amber
> >
> > Regards
> >
> > *Elvis Martis* Ph.D. Student, Bombay College of Pharmacy
> > [image: photo] Email: elvis_bcp.elvismartis.in " target="_blank"><
> elvis_bcp.elvismartis.in>
> > Website: http://www.elvismartis.in <http://www.elvismartis.in/>
> > group website: http://www.profeccoutinho.net.in/
> > Address:
> > ​
> > Kalina, Santa Cruz [E]
> > ​, Mumbai, 400 098, INDIA​
> >
> > Alt. e-mail: emartis12.live.com
> > <https://in.linkedin.com/in/elvisadrianmartis>
> >
> >
> > On 27 November 2016 at 12:33, Mohaddeseh Habibzadeh <
> > " target="_blank">m.habibzadeh.azaruniv.edu> wrote:
> >
> > > [image: Boxbe] <https://www.boxbe.com/overview> This message is
> eligible
> > > for Automatic Cleanup! (m.habibzadeh.azaruniv.edu) Add cleanup rule
> > > <https://www.boxbe.com/popup?url=https%3A%2F%2Fwww.boxbe.
> com%2Fcleanup%3Fkey%3DLRyJgmc5pupuYccBA0MExg%252Bft3YlRSFpK67bi%252FQhvgw%
> 253D%26token%3D5lP9qC0%252FTLZ2mIBQ62aAjJK3eQ5jW1rSwAYnBDVs%
> 252FLtksenONFXQX8gr9eIWapt7WnGZQbW0po8toskTOlaz689XxgqmM6pyO
> 736daFKijn4oKVPbh4Qq%252BD%252BXpjXblZpM5FPf6irUL71%
> 252FLLzhno4Jg%253D%253D&tc_serial=27757384090&tc_rand=
> 1477965243&utm_source=stf&utm_medium=email&utm_campaign=
> ANNO_CLEANUP_ADD&utm_content=001>
> > > | More info
> > > <http://blog.boxbe.com/general/boxbe-automatic-
> cleanup?tc_serial=27757384090&tc_rand=1477965243&utm_source=
> stf&utm_medium=email&utm_campaign=ANNO_CLEANUP_ADD&utm_content=001>
> > >
> > > There's a question in installing AmberTools16 separately !
> > > Is it necessary to export AMBERHOME again for amber16?
> > > Or export AMBERHOME=$AMBERHOME=/opt/amber14
> > > Best regards
> > >
> > > On Sat, 11/26/2016 08:52 PM, David A Case " target="_blank"><
> david.case.rutgers.edu> wrote:
> > > > On Sat, Nov 26, 2016, Mohaddeseh Habibzadeh wrote:
> > > >
> > > > > I'm installing Amber14 with Ambertools16.
> > > >
> > > > You can't do this in any direct way: AmberTools16 should be extracted
> > > into a
> > > > directory tree headed by "amber16"; Amber14 needs to be in a
> directory
> > > tree
> > > > headed by "amber14".
> > > >
> > > > If you are unable to upgrade to Amber16, use AmberTools16 for
> everything
> > > > except pmemd, and use Amber14 for pmemd. I don't think there should
> be
> > > any
> > > > problems with that combination.
> > > >
> > > > ....dac
> > > >
> > > >
> > > > _______________________________________________
> > > > AMBER mailing list
> > > > AMBER.ambermd.org
> > > > http://lists.ambermd.org/mailman/listinfo/amber
> > > >
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> > >
> > >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Nov 27 2016 - 00:30:03 PST
Custom Search