Please check "trajout" command in cpptraj. This question is popular on mailing list so google will help you further.
For your future reference, cpptraj has very extensive testing and those can give you very comprehensive examples
https://github.com/Amber-MD/cpptraj/tree/master/test
Hai
Hai Nguyen
> On Nov 25, 2016, at 5:47 PM, The Cromicus Productions <thecromicusproductions.gmail.com> wrote:
>
> Hi everyone,
>
> is there an easy way, without using vmd, to convert mdcrd files (with their
> prmtop file) into pdb files? I'm trying to automate a procedure in bash and
> that would be very helpful.
> Thanks a lot!
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Received on Fri Nov 25 2016 - 15:00:03 PST