Re: [AMBER] Filename being truncated by pmemd.cuda

From: David A Case <>
Date: Mon, 14 Nov 2016 15:31:53 -0500

On Mon, Nov 14, 2016, Andreas Tosstorff wrote:
> I have been experiencing some issues with the filepath and filename of my
> output files when using pmemd.cuda:
> The input file reads:
> DUMPAVE= ./Dropbox/PhD/Trastuzumab/Her_Modeller_2_FabHer/TRZ_2016_95/10ns_63.5.dat
> But the name of the name of the outputfile is being truncated to
> …/10ns_63.5.da

This is odd, but I wonder if mail formatting is contributing to the confusion.
Specifically: are you losing both the beginning and the end of the filename?
What is the first character of the output filename? (Shows up as a weird
character in my mail reader.)

Can you try a quick test using an absolute path (no "./" at the beginning)?
Or post the shorter filename that works for you? Any chance that there are
non-eight-bit characters in your filenames?


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Received on Mon Nov 14 2016 - 13:00:03 PST
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