Hi everyone,
open-mpi version is 2.0.1. and open-mpi example test is passed.
I have used open-mpi to compile cuda and cuda.mpi verion of amber16 without
any problems. But error was encountered in the cpu-mpi version of amber16.
The information are list below:
Thank you for your help.
Jacky
mpicxx -Wall -Wno-unused-function -c -I/home/user/amber16/include -O3
-mtune=native -fPIC -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ
-DHASGZ -DHASBZ2 -D__PLUMED_HAS_DLOPEN -DMPI
-I/home/user/amber16/include -DUSE_SANDERLIB -o FileIO_Mpi.o
FileIO_Mpi.cpp
FileIO_Mpi.cpp: In member function 'virtual int FileIO_Mpi::Seek(off_t)':
FileIO_Mpi.cpp:33:28: error: 'SEEK_SET' was not declared in this scope
if (pfile_.Fseek(offset, SEEK_SET)) return 1;
^
FileIO_Mpi.cpp: In member function 'virtual int FileIO_Mpi::Rewind()':
FileIO_Mpi.cpp:39:24: error: 'SEEK_SET' was not declared in this scope
if (pfile_.Fseek(0L, SEEK_SET)) return 1;
^
make[4]: *** [FileIO_Mpi.o] Error 1
make[4]: Leaving directory `/home/user/amber16/AmberTools/src/cpptraj/src'
make[3]: *** [parallel] Error 2
make[3]: Leaving directory `/home/user/amber16/AmberTools/src/cpptraj'
make[2]: *** [cpptraj] Error 2
make[2]: Leaving directory `/home/user/amber16/AmberTools/src'
make[1]: *** [parallel] Error 2
make[1]: Leaving directory `/home/user/amber16/AmberTools/src'
make: *** [install] Error 2
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Oct 18 2016 - 04:00:03 PDT
