Re: [AMBER] compile Amber16 with the intel compiler

From: Vlad Cojocaru <>
Date: Mon, 17 Oct 2016 20:20:39 +0200

Yes, this is actually what I meant ... writing fast between the lab
and home is not a good idea ... sorry ...

The environment for the intel compiler is loaded on top of the basis
which includes gcc 4.8.5 ... This means that the list of directories to
search for .h files (I called these "include" directories or "include
list") begins with those from intel ("last" loaded)... Then, the gcc
compiler will find the intel .h files first and will try to use those
... I guess this is what is happening ....


On 10/17/2016 07:56 PM, David A Case wrote:
> On Mon, Oct 17, 2016, Vlad Cojocaru wrote:
>> Is it possible that gcc tries to load the last "math.h" file it finds in
>> the include list ? That would be the intel one ...
> Perhaps, but what do you mean by "the include list"? (Generally, I'd think
> that a compiler would use the first math.h file it finds, not the last one.)
> ....dac
> _______________________________________________
> AMBER mailing list

Dr. Vlad Cojocaru
Computational Structural Biology Laboratory
Department of Cell and Developmental Biology
Max Planck Institute for Molecular Biomedicine
Röntgenstrasse 20, 48149 Münster, Germany
Tel: +49-251-70365-324; Fax: +49-251-70365-399
Email: vlad.cojocaru[at]
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Received on Mon Oct 17 2016 - 11:30:02 PDT
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