One option would be to learn how to use the Amber programs to do the
simulation. I suggest looking over the tutorials to see what may apply.
Bill
On 9/28/16 10:46 PM, ruqaiya khalil wrote:
> Dear All,
>
> I want to simulate a protein with FMN (oxidized) as co-factor. I found the
> parameters in the AMBER parameter database. The available file formats are
> OFF file and FRCFLD.
> I could not find any information about using them. I wonder if anyone can
> tell me how to use these formats.
>
>
> Best,
>
> Ruqaiya
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Received on Thu Sep 29 2016 - 00:00:02 PDT
