Respected Sir,
As you suggest i have add all the hydrogen in lig.pdb by using pymol
software and after that i run the antechamber command but the sae massege
is apper as earlier, which i mention in my last mail. How can i resolve
this plz suggest me.
Thanx
Vishal
On Fri, Aug 12, 2016 at 1:08 AM, David A Case <david.case.rutgers.edu>
wrote:
> On Thu, Aug 11, 2016, Vishal Nemaysh wrote:
> >
> > all necessary hydrogens are present in lig.pdb.
>
> This is incorrect, as far as I can see. There are only three hydrogen
> atoms
> in the lig.pdb file you attached. Antechamber needs all the hydrogen atoms
> to be present.
>
> ....dac
>
>
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--
Vishal Nemaysh
Research Scholar,
Neuropharmaceutical Chemistry Group,
Dr. B. R. Ambedkar Center for Biomedical Research,
University of Delhi, Delhi-110007
Email: *vishal.bioinfotech.gmail.com <vishal.bioinfotech.gmail.com>*
Phone: 91-11-27662778 Mobile: 91+8447581401, 91+9650736653
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Received on Fri Aug 12 2016 - 00:00:02 PDT
