Re: [AMBER] MMPBSA.py TrajError: Could not find number of frames in .mdcrd

From: David A Case <david.case.rutgers.edu>
Date: Fri, 5 Aug 2016 07:49:56 -0400

On Fri, Aug 05, 2016, maryam azimzadehirani wrote:

> TrajError: Could not find number of frames in
> mmgbsa_80_100_reimage_100f.mdcrd

> I checked the trajectory and inputs and everything seems to be OK.

Can you say exactly how you decided that everything was OK? First thing
to do is to use cpptraj to open the file listed above, and find out how
many frames it has. Be sure to use the same prmtop file as the mm/pbsa
script is using.

...dac


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Received on Fri Aug 05 2016 - 05:00:02 PDT
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